YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|55715455
Protein type:	Globular with Signal Peptide
Type Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYLDTKNLTA SSTSALTAGT ASNSKSTRRM RNVWKPLSRL LKVGGKGRTA QATLAHPNNV  60
   61 DLNNTQQQQQ QQQELLIEDD TKSTPEESIH KYGLELRQLP EEEQESLTQP PNTPTLISSV 120
  121 HVDKVSAQSC GNCQHGRNCQ HRHHSSNINS SSNMNSSSAT QLPSNLWDLQ LPLQYISTDN 180
  181 GTFFWANTQD RVDDDLLHAL LCQSFSQLPG TLC

Type	Start	End	Confidence
Signal Peptide	1	24	0.75
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	213	0.99