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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|58477106
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWLFLGIAGL LTAVLSGLPP PAPSDQHRNG SIPNMSSDPE EQLGIRLVNG SSRCSGFVQV  60
   61 LLESWEPVCA GHWNRAATEA ACNALGCGDL GNFTHLAPPT SERPPGATSR NTSSSRNTTW 120
  121 AGAPTVRCHG ANWQLCKVED YECSSDRRLV WVTCAENQAV RLVDGGSRCA GRVEMLQHGE 180
  181 WGTVCDDTWD LDDANVVCKQ LKCGWAVKAL AGLHFTPGQG PIHRDQVNCS GTEAYLWDCP 240
  241 GRPGDQYCGH KEDAGVVCSE HQSWRLTGGV DSCEGQVEVY FRGVWSTVCD SEWYPSEAKV 300
  301 LCQSLGCGSE VDRPKGLPHS LAGRMYYSCK GEELTLSTCS WRFNNSNLCS QSLAARVVCS 360
  361 GSQRHPNLST SEVPSRVPVT IESSVPVSVK DKDSQNLTLL IPCIVLGILL LVSLIFIVFL 420
  421 LLKAKGQYAL PTSVNHQQLS TANPAGINNY HPVPITIAKE DSQRHRVTEE EAQQNRFRMP 480
  481 PLEEGLEELH VSNIPAADPR PCVVDAPSLG SQYHTRNNSD SSTSSEEGYC NDPSSKPPPW 540
  541 NSQVFSEKSP LTEQPPNLEL AGSQAMFSGN RVSFQAPNPV SNLPRRGTDP NPELLAV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle