YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PPIB_BOVIN
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRLSERNMK ILFVAALVVG SVFFLLLPGP SAADEKKKGP KVTVKVYFDL RIGDEDIGRV  60
   61 VIGLFGKTVP KTVDNFVALA TGEKGFGYKD SKFHRVIKDF MIQGGDFTRG DGTGGKSIYG 120
  121 ERFPDENFKL KHYGPGWVSM ANAGKDTNGS QFFITTVKTA WLDGKHVVFG KVLEGMDVVR 180
  181 KVESTKTDGR DKPLKDVTIA DCGKIEVEKP FAIAKE

Type	Start	End	Confidence
Signal Peptide	1	33	0.99
N-region	1	24
H-region	25	30
C-region	31	33
Cleavage Site	33	34
Non-Cytoplasmic	34	216	0.99