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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|60279655, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.91
Topology Confidence: 0.46
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRRWWRLDC LGSAIALFVI ISQISAQNTE DWHYEECKLS RSGPPATIVT IDEESPNGTI  60
   61 LVENMQINGR ARDPDRTISL TLLDNYDYWV ILDPALQRLF LNSTGRVLDR DPPSSITTIV 120
  121 VQIQCTNELV GTVILHEVRI VVRDRNDNTP RFQQPRYYVS VNELTPVGTT IFTGFSGNNG 180
  181 ATDIDDGPNG QIEYAIQYNP NDPMSNRTVR IAGTLSGNIV LAERLNYEER TRYLIIVQAN 240
  241 DRAPYPGTRR TATTTLTLDV LDGDDLGPMF LPCVLVNNTQ DCNPVTYRVA IPELTDPNKL 300
  301 NPLNVTPPIR AIDQDRNIQP PSDRPGILYF ILVGTPSTYP EFFTLNRSTA ELRLLKSVDR 360
  361 ELYQRFSLVI KAEQDNGHPL PAYSKLEIEI LDENNQAPYF QQSSYRGFVS ESSSVGTTIS 420
  421 ASANLTAPLA IIALDNDIEE TKDPQLKITL NEYTSIFTIT TSGITRFLTL LKPVDREIQT 480
  481 NYTLTLVATD GVQQSRPVTV DILVIDANDN TPTFAQVSYS VEIFTNMLPG ETVLQLMAQD 540
  541 ADAGLNGLIT YAILAGDHGD FIINNRTGRI TLAPGVMLTV GRSYALTVRA ADNAPDTERR 600
  601 SSITTVYIEV LPPNNQSPPR FPLQTYNLEI SEAMRIGAIL LNLQATDREL DPITYRIETG 660
  661 DPQEVFNLSR TIGLLLLAKP LDRETIDQYR LIVTASDGHP GGISTATVSI VITDVNDNDP 720
  721 TFDLTLPRNL TVREEEANVF VGQVRATDPD GGLNGQVRYR LLSFASLFSI NSTGSIFTAV 780
  781 PLDRETRSRY DLIVEASDGA VDPRRTTITL LVEVLDINDN SPVFSQPVYT VNVPENTPAG 840
  841 SIILRLTAVD ADLVSNVTYR IKTEAALQLF AVNRLTGVIS VLQALDFESL AAGNSTYTFE 900
  901 VEALDHGGVL PPGTATVSVR ITDMNDFSPV FRQALYKGLV APNAEKGTVI TTVLAEDQDP 960
  961 PGTPASKVRY RVDQELSPYS GSIFDVETDT GLVITKVNLN EQPTTVFKLV VMAYDDGEPV1020
 1021 KTNRTTVEIT VLQPSRIPIF TEEEYRFSPV SENAPIGTPV GLILAAATNT TVVYSIVSGN1080
 1081 EGGVFTVNKS TGIIYTNKSL DYENVTSYVL RVQADSLTVI LANLRAPSKT NTAKVFINVQ1140
 1141 DENDHPPVFS RQVYIGGVTE DTKTFTTVLK IVATDVDTGN YSKMAYRLII PPTTEGQDSF1200
 1201 VIEPYTGVIK SAIMFRNMRR SYFKFQVVAT DDYGKGLTSK ADVVVSVVNA LDMQVVVSNV1260
 1261 PPTVVEENKE QLISILERYV QDQIPGAKVI VESIGPRRHG EGYELEDYSK SDLQVYAIDP1320
 1321 LTNRAISRQE LFKFLDGKIL DINKEFQPYL GEGGRILEIR SPDIVATVKK AAQAVGYTEG1380
 1381 ALLALAIIII LCCIPAILIV MVTYKQFKER QAECAKTARI QMALPAGKST GGGGGGGGGG1440
 1441 GGGGGAQTNL YEELGDGGML GLQRRRRSVI EEADRQSLIR NFASRAIAAH KQTTGNGQMR1500
 1501 SKLPKSESAI TFLSDERPLT TQNPIFQDGL SSSPEPNLEV RRISGFLYSD PPSPTSPCGQ1560
 1561 FTSWSLPSRI RGRGFYSTLR RQALWDPAQW EEQQLKAELT DSREELDADQ SGRSTETKLS1620
 1621 VREQARQFEA LADRTPRQSR DSYASLDPDD PLLGTIMLSY STISVGKDSP PCIIITGDDG1680
 1681 ETPPPPTAQR PTPPVVRKFS SSISNYMTVE PCEILLEFIS DFPGSPPPSP PSLVPSRSFL1740
 1741 SPPCLELDCT PPPTPPPIQS PEIPVQCPTF KPKGILKNSD RFGCSPDVKY DNKNDV

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