YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|59719232, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.90
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDNQEINNGR RRFLTLATCG AGGVAALGVA TPFVASFFPS EKAKASGAAV EVDVSKIEAG  60
   61 QLLTAEWQGK PIWVLNRTDQ QLKDLKGLNG ELTDPNSDAE QQPEYAKNET RSIKPNILVA 120
  121 IGICTHLGCS PTFRPDIAPA DLGADWKGGF FCPCHGSKFD LAGRVYKGVP APTNLVVPPY 180
  181 KYLSDTTILV GED

Type	Start	End	Confidence
Cytoplasmic	1	12	0.83
Transmembrane Helix	13	35	0.81
Non-Cytoplasmic	36	193	0.96