YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|59800809, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSKQISNLN SSSNKPKILS LFSGCGGLDL GFHQAGCETV WANDFSHWAC ESFRKNIGDV  60
   61 IVEGDIEQIN PNDPTIPDCD IILGGFPCQD FSMIWKQPGL EGERGNLYKS FLRFVNAKKP 120
  121 KVFVAENVKG LLTANKKKAI QQIITDFENC GYYVQAKLYN FAEFGVPQFR ERVLIVGVRL 180
  181 DTGFDFRHPE PTHNETGENG LKPYVTAGQA ISNIPQNASN NELLKISDKT RRMLELIPEG 240
  241 GNFTDIPKDH PLYVKGMISH VYRRMHRNEP SKTIIAAGGG GTWGYHFPEP RAFTNRERAR 300
  301 LQSFPDDFEF VGSTTEVRRQ IGNAVPPQGV VELAKSILPI FSDNYEKVDL HEKLVEEKEI 360
  361 LFHDRLSKIR GGKQ

Type	Start	End	Confidence
Signal Peptide	1	35	0.58
N-region	1	26
H-region	27	32
C-region	33	35
Cleavage Site	35	36
Non-Cytoplasmic	36	374	0.99