YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|59717620, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKAKRFKINA ISLSIFLAYA LTPYSEAALV RDDVDYQIFR DFAENKGKFF VGATDLSVKN  60
   61 KRGQNIGNAL SNVPMIDFSV ADVNKRIATV VDPQYAVSVK HAKAEVHTFY YGQYNGHNDV 120
  121 ADKENEYRVV EQNNYEPHKA WSASNLGRLE DYNMARFNKF VTEVAPIAPT DAGGGLDTYK 180
  181 DKNRFSSFVR IGAGRQLVYE KGVYHQEGNE KGYDLRDLSQ AYRYAIAGTP YKDINIDQTM 240
  241 NTEGLIGFGN HNKQYSAEEL KQALSQDALT NYGVLGDSGS PLFAFDKQKN QWVFLGTYDY 300
  301 WAGYGKKSWQ EWNIYKKEFA DKIKQHDNAG TVKGNGEHHW KTTGTNSHIG STAVRLANNE 360
  361 GDANNGQNVT FEDNGTLVLD QNINQGAGGL FFKGDYTVKG ANNDITWLGA GIDVADGKKV 420
  421 VWQVKNPNGD RLAKIGKGTL EINGTGVNQG QLKVGDGTVI LNQKADSNQK VQAFSQVGIV 480
  481 SGRGTLVLNS PDQINPNNLY FGFRGGRLDA NGNDLTFEHI RNVDEGARIV NHNTDHASTI 540
  541 TLTGKSLITN PNSLSVHSIQ NDYDEDNYSY YYRPRRPIPQ GKDLYYKNYR YYALKSGGSV 600
  601 NAPMPENGQT ENNDWILMGS TQEEAKKNAM NHKNNQRISG FSGFFGEENG KGHNGALNLN 660
  661 FNGKSAQNRF LLTGGANLNG KISVTQGNVL LSGRPTPHAR DFVNKSSARK DAHFSKNNEV 720
  721 VFEDDWINRT FKAAEIAVNQ SASFSSGRNV SDITANITAT DNAKVNLGYK NGDEVCVRSD 780
  781 YTGYVTCNTG NLSDKALNSF DATRINGNVN LNQNAALVLG KAALWGQIQG QGNSRVSLNQ 840
  841 HSKWHLTGDS QVHNLSLADS HIHLNNASDA QSANKYHTIK INHLSGNGHF HYLTDLAKNL 900
  901 GDKVLVKESA SGHYQLHVQN KTGEPNQEGL DLFDASSVQD RSRLFVSLAN HYVDLGALRY 960
  961 TIKTENGITR LYNPYAGNRR PVKPAPSPAA NTASQAQKAT QTDGAQIAKP QDIVVAPPSP1020
 1021 QANQAEEAKR QQAKAEQVKR QQAEAGRKSA ELSAKQRAGE EERRQTAQSQ PQRRKRRAAP1080
 1081 QDYMAVSQDR PKRRGHRSVQ QNNVEIAQAQ AELARRQQEE RKAAELLAKQ RAEAEREAQA1140
 1141 LAARRKAEAE EAKHQAAELA HRQEAKRKAA ESAKRKAEEE EHRQTAQSQP QRRKRRAAPQ1200
 1201 DYMAVSQDRP KRRGRRSTLP APPSPSFDSS AYAAPRALHN PDWYENDYEE IPLDALEDED1260
 1261 VSESVDTSDK QPQDNTELHE KVEAVSLQPR AAQPRTQAAA QADAVSTNTN SALSDAMAST1320
 1321 QSILLDTGAS LTRHIAQKSR ADAEKNSVWM SNTGYGRDYA SAQYRRFSSK RTQTQIGIDR1380
 1381 SLSENMQIGG VLTYSDSQHT FDQAGGKNTF VQANLYGKYY LNDAWYVAGD IGAGSLRSRL1440
 1441 QTQQKANFNR TSIQTGLTLG NTLKINQFEI VPSAGIRYSR LSSADYKLGD DSVKVSSMAV1500
 1501 KTLTAGLDFA YRFKVGNLTV KPLLSAAYFA NYGKGGVNVG GKSFAYKADN QQQYSAGAAL1560
 1561 LYRNVTLNVN GSITKGKQLE KQKSGQIKIQ IRF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle