YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|59717542, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRGSLEPLFI SCCPCASQEF QTASDVATPA SNQTAFYHPF ENPFCRYSSF YWSIAIMTAT  60
   61 TASSAKPYLQ IQGLVKKFGD NYAVDNIDLD IYQNEIFALL GSSGSGKSTL LRMLAGMESP 120
  121 NQGKIILDGQ DITKLAPYDR PINMMFQSYA LFPHMTVEQN IAFGLKQDKM PKGEIDARVE 180
  181 EMLRLVQMTK FAKRKPHQLS GGQQQRIALA RSLAKRPKIL LLDEPLGALD KKLRQQTQLE 240
  241 LVNTLEQVGV TCIMVTHDQE EAMTMATRIA IMSDGQLQQV GTPSDVYDYP NSRFTAEFIG 300
  301 ETNIFDGVVI ENHADYAVIE CEGLENHVRI DHGLGGPSEQ DLWVSIRPED IDLYKEKPEY 360
  361 LGDYNWAKGT VKEIAYLGSF AIYHIKLANG RVVKSQVPAP YWYVRNITPP TWDETVYISW 420
  421 PENQPTPLFR

Type	Start	End	Confidence
Signal Peptide	1	17	0.61
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	430	0.99