YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|58700408
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKDVEVAEH GEFSAKDYTD PPPAPLIDMA ELASWSFYRA IIAEFIATLL FLYITVLTVI  60
   61 GYKSQSATDQ CGGVGILGIA WAFGGMIFVL VYCTAGISGG HINPAVTFGL FLARKVSLIR 120
  121 AVMYMVAQCL GAICGVGFVK AFQKSYYVKF GGGANELADG YNKGTGLAAE IIGTFVLVYT 180
  181 VFSATDPKRS ARDSHVPVLA PLPIGFAVFM VHLATIPITG TGINPARSFG AAVIYNKDKA 240
  241 WDDQWIFWVG PFVGAAIAAF YHQFVLRAAA IKALGSFRSN AHN

Type	Start	End	Confidence
Cytoplasmic	1	36	0.89
Transmembrane Helix	37	60	0.85
Non-Cytoplasmic	61	76	0.77
Transmembrane Helix	77	102	0.82
Cytoplasmic	103	120	0.77
Transmembrane Helix	121	142	0.92
Non-Cytoplasmic	143	163	0.92
Transmembrane Helix	164	183	0.91
Cytoplasmic	184	195	0.85
Transmembrane Helix	196	216	0.89
Non-Cytoplasmic	217	244	0.88
Transmembrane Helix	245	266	0.90
Cytoplasmic	267	283	0.93