YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|58743494
Protein type:	Globular with Signal Peptide
Type Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKAAVFPSKI ASLGLPSGHR CALFFRSPPA LPSSFSTTPC RKLARGIRGS EGFMSQSSSS  60
   61 SQLFSSLSNS FSSQSESELP QVQLPSPKPK SPPPQLPWLI VGLGNPGKKY QGTRHNVGFE 120
  121 MVDALAEAEG ISMNTVNFKA LFGKGVIGNI PIMLAKPQTF MNASGESVGQ IVSFYKIPLK 180
  181 QVLVIYDDLD LPFGKLRLLP KGGHGGHNGM RSIIDRLKGS RDFPRLRIGI GRPPGKMDTA 240
  241 NYVLRQFNKQ EQEELDYTFQ TGLEAIRIML LEGFNKSATF VNTQKSMQQL S

Type	Start	End	Confidence
Signal Peptide	1	21	0.52
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	291	0.99