YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|59481179, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.91
Topology Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQVNSAQRKQ GGFTLLEVMV VIVILGVLAS LVVPNLLGNK EKADQQKAIT DIVALENSLD  60
   61 MYKLDNSVYP TTDQGLEALV SKPTATPEPR NYRADGYIRR LPNDPWGNEY QYLSPGDNGT 120
  121 IDIFTLGADG QEGGEGANAD IGNWNMQDFQ

Type	Start	End	Confidence
Cytoplasmic	1	11	0.61
Transmembrane Helix	12	33	0.81
Non-Cytoplasmic	34	150	0.72