YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|59480588, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.72
Topology Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNTIYNMAF YIENMMIIKK CDYRTTFYRL ISVIGLFISF FSSNVHAATD EQLDAIKHAA  60
   61 ETFLQSQIEV PQNGTLHIEA ARIDSRIQAT DCPAPLIASL PGRLNSSGNT SVLVECQPDD 120
  121 WKVYVPVKTE LMMPLVTAIS SLSRGHTISS SDLTLTMVNS RTYQRGGYIN VDDLVGARIK 180
  181 RSVRAGETVE KNDICMVCRN DSVIIKAVKG ELSIITKGTA LGDGALGDKV NVKNDKSNRI 240
  241 VNGIVTSVGE ISIRF

Type	Start	End	Confidence
Cytoplasmic	1	24	0.70
Transmembrane Helix	25	43	0.67
Non-Cytoplasmic	44	255	0.98