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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|59480351, gi|...
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKGLFHFIGK CFQAIWKLLS FTRQLVLNLF FLIFIGVIAF AFLDSTPPST EDKIVEPKAL  60
   61 ILDLSGPIVE ESKFREPLER ITSDVLGSQK SQENVLFDIV DTIRFAAHDN NVSGLVLHLK 120
  121 EMNETSLTKL RYIAKAINTF KAAGKPVYAI GDYYNQSQYY LASYADKVFM APDGTVLLRG 180
  181 YGAYTLYYKE LLEKLNVSTH VFRVGTYKSA VEPYLRNDMS DAAKESASAW LTQLWDAYLD 240
  241 DVATNRQIDP KTLTMPMDQF IAKLKSVNGD LSQMMVELGL VDKLATRQEV RKDLIEQFGS 300
  301 NGYDSFKQIS YYDYLSQVQP TVIPDAQDIA VVVASGAIMD GTERQGTVGG DSTAALLRQA 360
  361 RGDDKVKAVV LRVDSPGGSA FASEVIRNEI DALKEAGKPV VVSMSSVAAS GGYWISASAD 420
  421 KIIAQPTTIT GSIGIFGILT TFEKSLEKMG IHSDGISTSP FNGVSITRPL NDDVAQVMQL 480
  481 GIEHGYHRFI KLVSDHRNLS LEAVDKVAQG RVWTGKDALK HGLVDQLGDF DDAVQAAAQL 540
  541 ANMESYNLYW VKEPLTPMEQ FLEELSMNLN ASVRTELFSF APEALQPTIN KVATDINMLN 600
  601 NFNDPKGQYL FCLNCSNL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle