YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|59479586, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTELKKKKNK APLIATVIFI LCGALGAGYW YGYGQYFQST DNAYLQGDIT TISSKVGGYI  60
   61 QQTLVEDNQK VKAGDLLATI DDRDFLAEQE KAEANVAVNA AAITNLNAEL KLQDIRIRQS 120
  121 ASQIESAQAD LERAQQQVKR TKALIKKNYS SQDELDNNVS HLKVAIANLD AAKANYQASK 180
  181 EQINVIESQI GQANAMLNQA KTALDQANLN LSYTKIYAPI DGIVGKRSLR EGLLVQAGMP 240
  241 LLSLVPTKEV WIEANFKETQ LEKIHHGQKV FVDLDAYPDL HLKGIVESFS PATGAKFALL 300
  301 PPENATGNFT KIVQRVPVKI SILNTDLLDG KLIPGLSVVA TVDTRG

Type	Start	End	Confidence
Signal Peptide	1	26	0.70
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	346	0.99