YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|197316947, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYTAVKHIHL LLVACSVLFF VVRYCLMMAN SDIRNNGFFK RVPHVVDSAM LLSGIWLIFI  60
   61 TGFIPFTSSA PWLTEKITCI MVYLALGVVT LNNGKNKVFK TFAFLGAMGW LMVAAKIAVT 120
  121 KVPTFLG

Type	Start	End	Confidence
Non-Cytoplasmic	1	6	0.89
Transmembrane Helix	7	27	0.94
Cytoplasmic	28	44	0.86
Transmembrane Helix	45	66	0.90
Non-Cytoplasmic	67	71	0.81
Transmembrane Helix	72	91	0.87
Cytoplasmic	92	100	0.68
Transmembrane Helix	101	120	0.92
Non-Cytoplasmic	121	127	0.80