YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|59479136, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNAMSFLIST VFDLYIMVVI LRIWLQMARA DFYNPFSQFI VKATQPIVSP LRRVIPSIGS  60
   61 LDLATVLFAY VLCVFKFVAL QLVVSGGVAF GPEFLFIGLI ALAKAAGGLL FWILLVRAIL 120
  121 SWVSQGRSPI EYVMHQLTEP MLAPIRKILP QMGGLDLSVL VLFIVLQFAN FLMGDLIGPI 180
  181 WYSL

Type	Start	End	Confidence
Non-Cytoplasmic	1	5	0.75
Transmembrane Helix	6	25	0.87
Cytoplasmic	26	58	0.84
Transmembrane Helix	59	80	0.85
Non-Cytoplasmic	81	93	0.71
Transmembrane Helix	94	116	0.89
Cytoplasmic	117	152	0.85
Transmembrane Helix	153	174	0.86
Non-Cytoplasmic	175	184	0.79