YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|59479110, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.85
Topology Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKLVSLGDT FMIALLRLIA LAIFAVFTFV FGCGYCLLSP RNPKHVYTFG RLFARMSRVF  60
   61 GIKLEIRVPE SAKSSEPSLY IANHQNNWDL FTVSGAIQPR TVTVGKKSLA WMPLFGQLYW 120
  121 ITGNILIDRN NRSKAVGTIA QVAENIKKRN VSVWMFPEGT RSRGRGLLPF KTGAFHAAIA 180
  181 ADVPVTPIVC SNTQGNIKLN RWNNGHVIVE ILPPISSEGY EKDNVRELAN LCREQMITKL 240
  241 EELNKEVAER NQA

Type	Start	End	Confidence
Cytoplasmic	1	12	0.62
Transmembrane Helix	13	38	0.73
Non-Cytoplasmic	39	253	0.77