YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|59710693, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKVDVVVIG AGAAGLMCAA EAAKRGRSVL VVDHAKKPGR KILISGGGRC NFTNYDVTAS  60
   61 NYVCQNPHFV KSALSQYTNW DFISLISKYG IEFEERDHGQ LFCIDSAKEI VDMLLKECES 120
  121 VGVNYRYRCE ISGIKKTDTG FTLMLDLDEL ACESLVVATG GLSMPKLGAT PFGYQIAEQF 180
  181 GLSMVPTTAG LVPFTLHKED KEAFSELSGI AIPIVVESEN GSSFKENLLF THRGLSGPSI 240
  241 LQISSYWKAG QKVTIDLLPN DDLSEELDKM RESNPNQSIK NSLAKLLPKR VVETLLNKTI 300
  301 FNERSLKQVN PKEQQELCSL LHKWQVLPNG TEGYRTAEVT LGGVNTDELS SKTMESKKVP 360
  361 GLYFVGEVMD VSGWLGGYNF QWAWSSGYVA GINV

Type	Start	End	Confidence
Signal Peptide	1	22	0.99
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	394	0.99