YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|58581799, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARYLRALLM LDAAMTRHLL SVALIQERNH GDAEANLAVI ASRVAEAAAQ GAKLVLLQEL  60
   61 HNGAYFCQHE SVDEFDLAEP IPGPSTERLG ALAKQHGVVL VASLFERRAA GLYHNTAVVF 120
  121 EKDGRLLDKY RKMHIPDDPG FYEKFYFTPG DLGFTPIDTS VGRLGVLVCW DQWYPEAARL 180
  181 MALAGAELLL YPTAIGWDPD DQQPEQERQR DAWVLSHRGH AVANGVPVLS CNRVGHEPSP 240
  241 LGASGIQFWG NSHVLGPQGE FIAEAGQDPT VLICDVDLQR SEHVRRIWPF LRDRRIDAYG 300
  301 DLLKRYID

Type	Start	End	Confidence
Signal Peptide	1	23	0.72
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	308	0.99