YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|84623073, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPAATKSLA LALASAIALS ACATGGSYVQ RDQYGDQTQQ QNRTGRNALI GTAIGVAAGL  60
   61 LTGDSATERR QHAMIGAGIG ALSGAAIGQY QDRQERALRE RTANTGIEVQ RQGDNISLNL 120
  121 PDGITFDFGK SALKPEFYTA LNGVASTLRE YNQTMVEVVG HTDSVGSDAA NQRLSEERAG 180
  181 AVAQYLTAQG VQRERMETMG AGKRYPIADN NTDAGRAKNR RVEIRLIPLR AEGPASNTDM 240
  241 R

Type	Start	End	Confidence
Signal Peptide	1	23	0.99
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	241	0.98