YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|58425029
Protein type:	Globular with Signal Peptide
Type Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRSAGVVSA GVGAHRVSGS RCGRCVACAC RSCRARRDGR TGARGAWAAV CSGEYARRAA  60
   61 QRDGRSSRSA TCAKHCASSG AATAQPRRHA GSSADGLVAR VRLQSGRPCD TGLDGLLAVG 120
  121 RTARQSGCQA CAVAAAARVA AASGPRVSAL NVPQPTALRA MRESDLEVVM EIELRAYPFP 180
  181 WTRNIFRDCL QSGYPGWVME QGGRVIGYGV ISIAADEAHV LNVCIAPEAQ SQGHGRVLLR 240
  241 ALIKGACDRG ARRAFLEVRP SNPSAIALYH SEGFNEIGRR PRYYPSHSGR EDALVMAIEL 300
  301 FFEGFS

Type	Start	End	Confidence
Signal Peptide	1	19	0.84
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	306	0.99