YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|62734648, gi|...
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRPRTTLKS FYAPATPQSN LDPNPPQTAG TGGSNTQQAA AVVEAAIGET GARASNIQVQ  60
   61 HAPSTCEAAP SIVETVGSNI PQPEQEPHNS ETVELNPADI VADPGLRKPI EQFHIDIRDA 120
  121 VRREYLSRGP CQPIGHKYPQ KLMGNRQRSF HDSWFKMHNW LEYSIAKDAA FCFYCYLFKQ 180
  181 PRPDNFGVDA FTSKGFTNWK HATGSFNEHV GKVDSFHNRA RKHCEDFKNQ RQSVSYKMDS 240
  241 GSKKLEQQYY GRITMILGVV RFLLLQALAF RGHDESHGSS NKGNFLEMIE WYKEKDKDAQ 300
  301 KLLGNSPGNH LLTSPKIQKH LCKACANKTT KAILKDVGER NFAILVDESR DASIKEQMAV 360
  361 ILRYINSKGQ VIERFLGVEH VPDTTSVALK IALDAMIVSH GLSMHKVRGQ GYDGASNMRG 420
  421 EFHGLQRRVL DENPYAFYIH CFAHQLQLVV VSVAKCCSPV SDFFNYTPMI VNTVNGSCKR 480
  481 HDQLAQEHHD NLVSSLETGE IFSGRGKNQA TNLARPGDTR WGSHHKTLCR LQHMWKAVLE 540
  541 VLENICEDNP TTKTTATGLL KQMESFEFVL IMHLMIRLLG KTNDLSQCLQ KKDQNIIRAI 600
  601 GLIGTTLQKI NHIRQHGWQE LFEETKTFCL KYNIIVPDMS DTTTTRGRSR GRGGQLITYQ 660
  661 HHFNNEIFNV VHDQLIVELN NRFAERSTQL LRCIACLDPR NSFANFDEDK LIELARMYAA 720
  721 DFSPYDCIVL KDQLETFIAD VRADPHFLSC SDLGNLAMKM VQSDRHTVFP LVYRLIELAL 780
  781 ILPVATATVE RAFSAMNIIK TELRNKMADE WLNHRVVCYI ERDIFASIDN DKILTHFQEL 840
  841 RTRKMKLPLP SAGTYVQVKR SNGRLGVYKE FSNEVSMLML EADPQNATSI YNLHKDAKDK 900
  901 LNKSSMKDAK SLTQTYTSNT SLVAILIATI TFAAAFTLPG GYSSDAGNLG FPIMARKFVF 960
  961 QSFLIADTLA MCSSLVVAFI CIIARWEDLQ FLLHYRSFTK KLMWFAYMAT TVAFATGLYT1020
 1021 VLAPRLLWLA IGICLLSVLL PAITKVIGEW PVLKLRFRLG KTYNSDLLDM V

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle