YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|62732908, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRKASSTSD SRLKWRKWKR NPTASPSPSN RSSAAAAAAD HSDDSDSAAV NEDDDSAVPE  60
   61 DADDETLAGA EDPVLDLREA EVLPSAEPVS AFPVATRRVV NRPHPSVLAV IAAERSACAG 120
  121 EGSAAVAAAP VLENISYGQQ QVLSGVLPDH ASLATDTDKP STYVCTPPNL MEGHGVTKQF 180
  181 QGRLHVVPKH SDWFSPGIVH RLERQVVPQF FSGKSPGNTP EKYMLLRNKV IAKYLENPSK 240
  241 RLAFAECQGL VANTAELYDL SRIVRFLDTW GIINYLASGS VHRGLRMATS LLREEPTGEL 300
  301 QLLTAPLKSI DGLILFDRPK CNLQAEDISS LASNSEVVDF DAGLAELDGK IRERLSESSC 360
  361 SYCLQPLTSL HYQSLKEADI ALCSDCFHDA RYITGHSSLD FQRIDGDNDR SENDGDSWTD 420
  421 QETLLLLEGI EKYNDNWNNI AEHVGTKSKA QCIYHFIRLP VEDGLLENIE VPDASVPFRA 480
  481 ETNGYPHLDC NGSTSGNLPQ KIPPDNQLPF INSSNPVMSL VGFLASAMGP RVAASCASAA 540
  541 LSVLTVDDDS RVNSEGICSD SRGQGPHPNF RDHNGGVSSS ISPEKVKHAA MCGLSAAATK 600
  601 AKLFADQEER EIQRLTATVI NHQLKRLELK LKQFAEVETL LLKECEQVER IRQRIASDRV 660
  661 RIVSTRLASP GNSLPGGSTS TMSSNPMSMS PRPMGVPGSM PQSSMPAPFA NNMQGHGHPQ 720
  721 MAFLQQQQRQ QMLSFGPRLP LSAIQTQPSP QTSNIMFNPG MPNSVTPNHH QLLRSSSGNN 780
  781 SSVG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle