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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|125576431, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.52
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVEEGRSLAE TPTWSVATVT TLMVAACFLV ERGISRFAKW LRKTKRKAML AALEKIREVL  60
   61 LLARCLIVFL TKGNPCLIAE LMLLGVISLL LSQTARWISE ICVPSSLFTS RFYICSETDY 120
  121 EDLVVGGKRS TMEMNQTVVP NGLFGIQSQN VCSEGHEPFV SYEGLEQLHR FLFILGITHV 180
  181 LYTFVTVVLS MIKIYSWRKF ETQACQLPTE QLQARRTKVM QRQSTFVFHH TSHPWSKNKI 240
  241 LIWMYHKLPH SYNFHKYMVR SMEDDYNGSV GISWPLWAYA IICIFVNIHG LNIYFWISFA 300
  301 PAILVLLVGT ELQHVIAQLA LEVVGATAPY VGTQLKLRDD LFWFGKPRVL WWLIQFISFQ 360
  361 LELSAQSCFM KNHYMIVLRL TSGILVQFWC SYNTLPLNVI ITQMGSKFKK SLVSESVRES 420
  421 LHSWCKRVKD KNRHNLASRS VCSLDTTYEE TDHETATVGT LSRTVSATSL DEELTVATVE 480
  481 DNDDDEEMSR IEQEIDRSLG GTRFPWFCQA DEFLIWGLFT GGDRVAVWDG CSRLLRAEVG 540
  541 CCGHSPGAAA AAARVVKAIA NPDPAVELPL TAENVEIVLD EVRPYLMADG GNVALHEIDG 600
  601 NVVRLKLQGA CGSCPASVTT MKMGIERRLM EKIPEIVAVE PIADEETGLE LNQENIEKVL 660
  661 DEIRPYLSGT GGGELEFVAI EEPIVKVRLT GPAAGVMTVR VALTQKLREK IPKIAAVQLL 720
  721 SRKKRNAGAT NGIGRETARV LARRGAEVII PARTMESGNA VKQSIAEEVP GSRLHVMEMD 780
  781 LASLDSVRRF ATAFDSSHTH LNILINNAGI MGCPFKLSKD GIELQFATNH VGHFLLTNLL 840
  841 LDKMKSTARK TGVQGRIVNV SSIAHKRSDG SCFDLNKLND KSRSAMCSFL LLPRTLSQCV 900
  901 MVSILSVGNL FLKNTQQGAA TTCYLALHPE LKDVSGKYFA DCKEATPRPA ARDAELAKRL 960
  961 WDFSEQLVDT NRRGEFNRQK 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle