YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	NB5R2_XENLA
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLVALAAIGV TVLLFLIKAL GSGAKKAPVT LLDPNAKYPL PLIEKQEISH DTKKFRFGLP  60
   61 SAEHVLGLPV GQHIYLSAKV NGSLVVRAYT PVSSDEVKGH VDLVVKVYYK NVNPKFPDGG 120
  121 KMSQHLDSLK IGETIDFRGP NGLLVYKGKG KFAIRPDKKA EPKIKVAKHV GMLAGGTGIT 180
  181 PMLQLIRQIT QDPNDNTKCY LIFANQTEDD ILLRYELETV AKSHPEQFKL WYTLDRPPQG 240
  241 WKYGSGFVTA DMIKEHLPPP SEDVLVLMCG PPPMIQFACQ DNLTKLGYPE AGRFAY

Type	Start	End	Confidence
Signal Peptide	1	21	0.99
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	296	0.99