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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|59063175, gi|...
Protein type: Transmembrane
Type Confidence: 0.85
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWLLLHVVLL MEVKDFTLAG SNMVAPLCPK GYFPCGNLTK CLPRAFHCDG VDDCGNGADE  60
   61 DNCGDTSGWT TIFGTVHGNV NKVTLTEECF LSRYPQHCYC RENELECVNA DLKAVPKVSS 120
  121 NVTLLSLKKN KIHRLPVKVF SKYAELRKIF LQHNCITHIS RRAFLGLHNL QILYLSHNCI 180
  181 TSLRPGIFKD LHQLAWLILD DNPITRISQR SFTGLNSLFF LSMVSNRLEA LPERLCAQMP 240
  241 QLNWVDLANN GIKFITNSTF LTCDSLTVLF LPRNQIGFVP EKTFSSLKNL GELDLSSNVI 300
  301 AKLPAHLFSD LHLLQKLNLS SNPLLYVHKN QFGSLKQLQS LDLERIEIPN INTGMFRPMK 360
  361 NLSHIYLKTF RYCSYVPHVR ICMPSTDGIS SSEDLLANSI LRVSVWVIAF ITCAGNFLVI 420
  421 AVRSLIKAEN TTHAMSIKIL CCADCLMGVY LFSVGVFDIK YRGQYQKYAL LWMESVPCRL 480
  481 LGFLATLSTE VSVLLLTFLT LEKFLVIVFP FSNLRLGKRQ TAVVLASIWV AGFLIAAVPF 540
  541 TSEDYFGNFY GKNGVCFPLH YDQAEDFGSR GYSLGIFLGV NLLAFLVITF SYVTMFCSIQ 600
  601 KTALQTAEVR SHIGKEVAVA NRFFFIVFSD AICWIPVFVV KILSLLQVEI PGTITSWIVV 660
  661 FFLPVNSALN PILYTLTTSL FKDKLKQLLH KHRRKSIFKV KKKSLSASIV WTDDSSLKLG 720
  721 VLNKIALGDS IMKPVSP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle