YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	NB5R1_RAT
Protein type:	Globular with Signal Peptide
Type Confidence:	0.46
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGIQPSPVLL ASLGVGLFTL FGLALGTYLV RRSRRPQVTL QDPDEKYLLR LLDKTTVSHN  60
   61 TRRFRFALPT AHHILGLPVG KHVYLSARID GSQVIRPYTP VTSDEDQGYV DLVIKVYLKG 120
  121 VHPKFSEGGK MSQYLDSLKI GDVVEFRGPS GLLSYAGKGN FNIQPNKKSP PELRVAKKLG 180
  181 MIAGGTGITP MLQLIRAILK VPEDPTQCFL LFANQTEKDI ILREDLEELQ AQYPIRFKLW 240
  241 FTLDYPPEDW TYSKGFVTAD MIQEHLPAPA EDVLLLLCGP PPMVQLACHP NLDKLGYSQK 300
  301 MRFTY

Type	Start	End	Confidence
Signal Peptide	1	26	0.45
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	305	0.77