YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CLM1_RAT
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHLSLLALFL FWISGCFTAQ DPVTGPEEVS GYEQGSLTVW CRYGSWWKDY SKYWCRGPKR  60
   61 SSCEIRVETD ASERLVKENH VSIRDDQTNF TFTVTMEDLR MSDAGIYWCG ITKAGYDHMF 120
  121 KVHVSINPVP TTPTTTSTTT IFTVTTTVKE TSTLSTQTSH YSDNRYDSGG VGDGNGFLDL 180
  181 SVLLPVISAA LLLLLLVVSL IAWRMVRRQK KAAGPPSGQA DSVTHILCPP KPHVQPLEDD 240
  241 LCYANLSLQQ PRTSPLKKGS SMSSSGKDHQ EEVEYVTMAP FPREEISYAA LSLASLGQEP 300
  301 TYSNTACLVT HGPRTNLGEE TTEYSSIRRP MP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle