YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|62543557, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.73
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPLPGWESS PWSRADNTFR LVPCVFLLNL LQCISAQPLC RQEEFSVGDE CCPMCNPGYH  60
   61 VKQVCSEHTG TVCAPCPPQT YTAHANGLSK CLPCGVCDPD MGLLTWQECS SWKDTVCRCI 120
  121 SGYFCENQDG GACSTCLPHA ACPPGQRVQK RGTYSHDTVC ADCLTGTFSL GGTQEECLPW 180
  181 TKCSTFQREV KHGTSSTDTT CSFQTFYIVV VIVGVAIVGA GVVVFLLRKQ RQRHTSIVAS 240
  241 ELEAFQQEQQ EDAIRFPVIE VGPSVTEEEA AFNCMNSG

Type	Start	End	Confidence
Non-Cytoplasmic	1	204	0.89
Transmembrane Helix	205	227	0.95
Cytoplasmic	228	278	0.97