YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|60688321, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIYTSRRCAL AGSGWPSRHG VVAAASGSDS EDEDSMDSPL DLSSSAASGK RRRRGNLPKE  60
   61 SVQILRDWLY EHRYNAYPSE QEKALLSQQT HLSTLQVCNW FINARRRLLP DMLRKDGKDP 120
  121 NQFTISRRGA KISEASSIEA AMGIKNFMPT LEESPFHSCV VGPNPTLGRP VSPKPPSPGP 180
  181 ILARPSVICH TTVTALKDGP FSLCQAVSVG HSTDVQQVAP SNFTDASLRY PEDTCKSGPS 240
  241 PNPQSGLFNT PPPTPPDLNQ DFSGFQLLVD VALKQAAEME LQAKLTA

Type	Start	End	Confidence
Signal Peptide	1	24	0.93
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	287	0.99