YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|58865746, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.25
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKLGGNLDL PFKVASPIPT SCLSWCTLPL TCLCCSMTGS FGRSFEKKLP VSLSQQKLLT  60
   61 WLSVLECVEV FMEMGAAKVW GEVGRWLVIA LIQLAKAVLR MFLLIWFKTG IQTSPPIVPL 120
  121 DRETQAQPLD GDHNLGSPEP SYVGKRSNRV VRTLQNSPSL HSRHWGAPQQ REIRQKQQQE 180
  181 ELSTPPTPLG LQETIAESLY IARPLLHLLS LGLWGQRSWA PWLLSGVVDM TSLSLLSDRK 240
  241 NLTRRERLEL RRRTILLLYY LLRSPFYDRF SEAKILFLLQ LLADHIPGIG LVARPLMDYL 300
  301 PSWQKIYFYS WG

Type	Start	End	Confidence
Signal Peptide	1	42	0.38
N-region	1	33
H-region	34	39
C-region	40	42
Cleavage Site	42	43
Non-Cytoplasmic	43	312	0.62