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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|58400808, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALAGAGSQL GTLVWGACLC VLVHGQQEQP GQGSDPGRWR QLIQWENNGQ VYSLLNSGSE  60
   61 YVPAGPQRGE SSSRVLLAGA PQTSQRRSQG GPRRRQAPNL PLPGRVGSDT VRGQTRHPFG 120
  121 FGQVPDNWRE VAVGDSNGMA RARTSVSQQR HGGSASSSVS ASAFATTYRQ PSSYPQQFPY 180
  181 PQAPFVNQYE NYDPASRTYE QGYVYYRGAG GGMGAGAAAA AVASAGVIYP FQPRARYEEY 240
  241 GGGGEEQPEY PAQGFYPAPE RPYAPQPQPQ PQPQPQPQPQ PSDGLDRRYS HSLYNEGTPG 300
  301 FEQAYPDPST DVSQIPAGAG GTYGAAGDPR LGWYPPYAAN VPPEAYVPPR AVEPQPPFRV 360
  361 LEPPYLPVRN SDAPSQGGER NGAQQGRLSV GSVYRPNQNG RGLPDLVPDP NYVQASTYVQ 420
  421 RAHLYSLRCA AEEKCLASTA YAPEATDYDL RVLLRFPQRV KNQGTADFLP NRPRHTWEWH 480
  481 SCHQHYHSMD EFSHYDLLDA STGKKVAEGH KASFCLEDST CDFGNLKRYA CTSHTQGLSP 540
  541 GCYDTYNADI DCQWIDITDV QPGNYILKVH VNPKYIVLES DFTNNVVRCN IHYTGRFVST 600
  601 TNCKIVQS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle