YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|59808946, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASRDTPPAT SYAPPEVPSG VAALFLTIPY AFFLPELVFG FWVWTLVAAT HVAYPLLHGW  60
   61 VLYVSLTSFL VSLMLLLSYI FGFYKRFESW RVLDSLYHGT TGILYMSAAV LQAHATIISE 120
  121 NQNLDHYYIN VAASFFAFLT TLLYILHAFS IYYH

Type	Start	End	Confidence
Cytoplasmic	1	20	0.84
Transmembrane Helix	21	44	0.80
Non-Cytoplasmic	45	59	0.70
Transmembrane Helix	60	83	0.90
Cytoplasmic	84	95	0.83
Transmembrane Helix	96	118	0.87
Non-Cytoplasmic	119	126	0.84
Transmembrane Helix	127	149	0.88
Cytoplasmic	150	154	0.68