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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ADCK3_RAT
Protein type: Transmembrane
Type Confidence: 0.57
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAMLGDAIM VAKGLAKLTQ AAVETHLQNL GLGGELILAA RALQSTAVEQ ISMVFGKVQG  60
   61 QDKHEDSYAT ENFEDLEAEV QFSTPQAAGS SPDFSTASSL DQPLSSSLGH AHREGPAPAY 120
  121 VSSGPFREAG LSGQATSPLG RVNGRLFVDC RDLFLANSIQ RRFFHQDQAP VGGLTAEDIE 180
  181 KARQAKARPE SKPHKQMLSE RARERKVPVT RIGRLANFGG LAVGLGFGAL AEVAKKSLRS 240
  241 ENSTGKKAVL DSSPFLSEAN AERIVSTLCK VRGAALKLGQ MLSIQDDAFI NPHLAKIFER 300
  301 VRQSADFMPL KQMTKTLNND LGPHWRDKLE YFEERPFAAA SIGQVHLARL KGGREVAMKI 360
  361 QYPGVAQSIN SDVNNLMAVL NMSNMLPEGL FPEHLIDVLR RELTLECDYQ REAAYAKKFR 420
  421 ELLKDHPFFY VPEIVDELCS PHVLTTELIT GFPLDQAEGL SQEVRNEICY NILVLCLREL 480
  481 FEFHVMQTDP NWSNFFYDPQ QHKVALLDFG ATREYDRSFT DLYIQVIRAA ADQDREAVLK 540
  541 KSIEMKFLTG YEVKAMEDAH LDAILILGEA FASEEPFDFG TQSTTEKIHN LIPIMLKHRL 600
  601 IPPPEETYSL HRKMGGSFLI CSKLKACFPC KAMFEEAYSN YCRMKSGLQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle