YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|61557232, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEAEGLGWLL VPLHQLVSWV AAGAMVFGGV VPYIPQYRDI RRTQNADGFS THVCLVLLVA  60
   61 NILRILFWFG RHFESPLLWQ SIVMILTMLL MLKLCTEVRV ANELNVKRRS FAATDSKDEE 120
  121 LRVPPRRPYL GVAGYITYLS IDSALFVETL GFLAVLTEAM LGVPQLYRNY RHRSTEGMSL 180
  181 KMVLMWTSGD TFKTAYFLLN GAPLQFSVCG LLQVMVDLAI LGQAYAFAHH PQKPAPHAVH 240
  241 PASAKAL

Type	Start	End	Confidence
Non-Cytoplasmic	1	14	0.87
Transmembrane Helix	15	35	0.92
Cytoplasmic	36	47	0.84
Transmembrane Helix	48	68	0.94
Non-Cytoplasmic	69	76	0.77
Transmembrane Helix	77	96	0.90
Cytoplasmic	97	134	0.84
Transmembrane Helix	135	156	0.67
Non-Cytoplasmic	157	201	0.62
Transmembrane Helix	202	227	0.60
Cytoplasmic	228	247	0.77