YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|74271919, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRVFTGLPA NHAAPSLALP LVLLLLMVSA RPSTGPDYLR RGWLRLLAEG EGCAPCRPEE  60
   61 CAAPRGCLAG RVRDACGCCW ECANLEGQLC DLDPSANFYG RCGEQLECRL DAGGDLSRGE 120
  121 VPEPLCVCRS QRPLCGSDGR TYAQVCRLQE VARARPDANL TVVHPGPCES EPQILSQPHN 180
  181 IWNVTGQDVI FGCEVFAYPM ASIEWRKDGL DIQLPGDDPH ISVQFRGGPQ KFEVTGWLQI 240
  241 QALRPSDEGT YRCLARNALG QAEASATLTV LTPDQLNATG FSQLQSQGLI PEEEAEDEEL 300
  301 EDYY

Type	Start	End	Confidence
Signal Peptide	1	30	0.99
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	304	0.99