YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|83638757
Protein type:	Transmembrane
Type Confidence:	0.91
Topology Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESNKDEAER CISIALKAIQ SNQPDRALRF LEKAQRLYPT PRVHALIESL NQKPQPAGDQ  60
   61 PQPTEATHTT HRKAAGANTA SANGEAGGES TKGYTAEQVA AVKRVKQCKD YYEILGVSRG 120
  121 ASDEDLKKAY RKLALKFHPD KNHAPGATEA FKAIGTAYAV LSNPEKRKQY DQFGDDKGQA 180
  181 ARHGHGHGDF HRGFEADISP EDLFNMFFGG GFPSSNVHVY SNGRMRYTYH QRQDRRENQG 240
  241 DGGLGVFVQL MPILILILVS ALSQLMVSSP PYSLSLRPSV GHVHKRVTDH LNVVYYVADT 300
  301 FSQEYTGSSL KMVERNVEDD YIANLRNNCW KEKQQKEGLL YRARYFGDAD MYNKAQKMGT 360
  361 PSCNRLSETM KSLENFW

Type	Start	End	Confidence
Cytoplasmic	1	241	0.64
Transmembrane Helix	242	267	0.77
Non-Cytoplasmic	268	377	0.82