YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|82700414
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGIKSFLLAT TVATGFVAAA TFSAGAQERV VNIYNWSDYI DDSILKDFTK ETGIKVVYDV  60
   61 YDSNEILETK LLAGGNGYDL VVPSGEFLGR QIPAGVFLKL DKDKLPNLKN MWDEISTRAA 120
  121 TYDPGNEYSV NYMWGTTGIG YNKAKIKEAL GTDTIDSWDV LFDPEKTAKL KDCGIYLLDS 180
  181 ASEMLRPALN YLGLDPNSPS PDDLQKAQDL YLKIRPNIRK FHSSEYINAL ANGDICMAVG 240
  241 YSGDIFQARD RAEKAKQGVE IGYSIPKEGA LIWFDQMAIP ADAKHVPEAL EFMNYMMRPE 300
  301 VAAKASNYVF YANGNKASQK FIDKEILDDP EIYPSDEVMK KLFVPTPYDT KTQRVVTRAW 360
  361 TKIVTGQ

Type	Start	End	Confidence
Signal Peptide	1	26	0.93
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	367	0.99