YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|82698969
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSAHQTHDH AAHGSLKSYL IGFVLAVILT VVPFALAMGG YFTPATTAVI VLAIAAVQIL  60
   61 VHLIYFLHLD PKSEGGWNML ALVFTGIILA IVLIGSIWIM YHLDTNMMPM YMTPDNVRNL 120
  121 P

Type	Start	End	Confidence
Cytoplasmic	1	18	0.91
Transmembrane Helix	19	38	0.95
Non-Cytoplasmic	39	45	0.70
Transmembrane Helix	46	67	0.93
Cytoplasmic	68	78	0.81
Transmembrane Helix	79	102	0.93
Non-Cytoplasmic	103	121	0.96