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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|83573887, gi|...
Protein type: Transmembrane
Type Confidence: 0.84
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERGKLMQYY EELKHIGLQR LQESMSQALG LAASVTYPDG QLLTKTSNLC SFCALLNANS  60
   61 EGRAKCGASR VIFARAAVDA GRAILDTCHA GLVHVAVPLR VAGKTVAVLV GGSVALKPLT 120
  121 EEEVAELARE TGIDQEELWV AAQGVPLWSE ERLRTAAEMI RAVTETLAQL LYTKQEQQKK 180
  181 ADELSALFEF SKTVSGSLQV AEAARQGLQA VLELTGATSG SVIMLGEAEP GAATLEVAAT 240
  241 LEPDNELRVI PAGEIIAAVE REAVAAHFES RPGESTPEEK RPAVAVPLTA GGKVTGVLTL 300
  301 AGKPGGQRFT GEEAIFLTTL GTILGLALEN ARLFRKVRER AAMLERLIEV GQVLSSHLDV 360
  361 DLVLESALAS VRDVLDARWC ALRVLDENTG ELVLRASLGM NQKLQARVAR VRPEDNLLGE 420
  421 VLQKGEPVVL EDLATDKSGR HLPYCALEMR ALVVVPVKAG GKILGTLKLY SPVPRRWSEE 480
  481 EVEYLGTVAA QIGLALENAR LYSSLREYYL STVQSLAAAL EAKDVYTRGH SIRVAKWARS 540
  541 CARMLGLGAE VEEQVYLAGL LHDLGKIGVQ EDILLKPGPL TPEERKEMQG HPEVGARILE 600
  601 PARFPAAVIA AVRHHHEDYE GGGYPAGLSG EEIPLLARII RVADAYDAMT SARPYRKAFA 660
  661 PEKARNELKR CAGQQFDPQV VKAFLRIPKE EMENISMGGG GTLIALLGEI LFLLRRLH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle