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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|83590824, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTVNVTSNLA QVNLPVQGMS CAACVAKVEK ALKNMPGVEE ARVNLLTGRA AVKYHPDRVS  60
   61 IPQIARTIQE IGYEVPEEEM LLTVRGMSCA ACVAKVEKVV KGIPGVTSVA VSLPAESARI 120
  121 RYYQGTVDRA RIKKEINALG YEATEKISGQ AALDREKEAR EREIRYQRRN MWIAWPLATL 180
  181 VMIGMFRDMW IFPYFVPKWL GNVYVLWALT TPVAFIPGWQ FFVHSWNGLK RGATDMNLLY 240
  241 ATGIGAAYII ATINTLWPEA GFGGRGATFF ESAALLTAFI VLGRYLEAIT RGRTSEAIRK 300
  301 LMSLQAKTAR VIRDGQEMEI AADEVEVGDI VVVRPGESIP VDGEVVEGYS AVDESMITGE 360
  361 SIPVEKRPGA QVVGATINKT GSFKFRATRV GSETALAQII KMVEEAQASK APIQRLADFV 420
  421 AGHFIAGVHV LALIVFFFWF FIGYDAFFRP DSHFILSPYS LAQVGVFGFA LLLSVTTLVI 480
  481 SCPCALGLAT PSAVMAGTGK GAENGILFKG ADAVEASSKL NAIVFDKTGT LTRGEPSVTD 540
  541 VIVAPGFEQK EILRLAAMAE KTSEHPLGEA IVRNAVEKGL ELEEVEDFEA IPGHGVRAIY 600
  601 QGREILLGNR RLMQQRNIAI SDLAGHMEKL EEEGKTAMLM AVDGRAAGII AVADTLKEHV 660
  661 KVAIERLHKM GIQVAMITGD NRRTAAAIAR QVGIETVLAE VLPQDKAEEV KKLQEKGLKV 720
  721 AMVGDGINDA PALAQADVGI AIGSGTDVAK ETGDIILIKD DIRDVVGAIE IGRATMRKIK 780
  781 ENLIWAFLYN SLGIPIAAGI LYPITGLIVS PELASFFMAM SSISVTLNTL TLKRFRPSLR 840
  841 AEREEAVPRH RPAPQAG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle