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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|83590546, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPEKKRKRK LNVFRAVLLT LLVLGVILVG AGAGFAIGII RTMPGWQPDN FKLDMTTFVY  60
   61 DRNNQLVGEL HGEQNRVVVP LDKIPVNLQN AVIATEDARF YQHHGIDLKA ILRAAIINLR 120
  121 HGSIQEGAST LTQQLARNAF IENPQRTFKR KIQEALMAIQ LERMYTKKEI LEKYLNIVYL 180
  181 GPGTYGVEAA AQYYFGTDVQ NLDLAQSAML AGIIQSPGNY NPFVKGNEQA AKDRQAVVLD 240
  241 NMVKYGYITQ EQANQAKAEK LTFKESKKAP VDKYPYYIDA VVEEASRLLE SNGIESSELY 300
  301 RGGLKIYTAL DPAIQTEMEQ VYQDKNNFPP SAKDRQIESA MVVLDPHTGE VRGLVGGRDY 360
  361 TTRRGFNRAI QAERQPGSTI KPLVVYAPAL EKGYPPAYVI DDVPTTFPGS PKPFTPRNYD 420
  421 GRYRGLISMR EALRWSVNVA AVKMLNTIGV DTGYDFGLRL GLPLKPEDRN LSLALGGLTT 480
  481 GVSPLEMAAA YGTFANQGVY ITPHLITRIT DHNGRDLIVV NPQKQAVMSE QSAYLMTDML 540
  541 ETVVTSGTGT RAQIGRPAAG KTGTTSLPET PEFKNLNGEK DAWFVGYTPE LVGAVWMGYD 600
  601 QTDPQHYLKS VAGGGYPALI WKKVIGAALK DKPVQDFPRP AGIIYADVDA KSGLLPSDLT 660
  661 PKEFIVKEIF TQSMLPTKVS DVWVQVQIDP TTGMLATPNC PNVTTGVFLR RPDGYTGKAE 720
  721 DSYLEAPRQY CTLHSGGNSN KAGLVSICTD PRHGGALFLA NIPGPGQSGG CPSQYVKQVQ 780
  781 LPPGQVPTRH CDLPDHQLSK STGGPSQDNG PPAPQLDAQL EVGPNVSQPR VILTWDVPDG 840
  841 GNYVFSVERS TGGSGHRSLA IVRQTSYTDT SVQPGVTYRY RVIALSGNDK SGTPSNEVTI 900
  901 AIPKK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle