YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|83573435, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRQKSKRVGK LIALFTGIAM LLFVAAGCSG TRAKGTVVVG SKDFTENILL GEIMAQLIEA  60
   61 HTDLKVERKL NLGGTLVNFN ALKKGDLDLY ADYTGTGLVA ILKRDVINDP QEAYDAVQKA 120
  121 YNEQFKLKWL KPFGFNNTYA LAVPEEVARQ RNLQKISDLK SVAGEMVLGA EQEFFNRPDG 180
  181 YDGLIVTYGL NFKSTKQMET GLKYEAIHNK MVDVIDAFAT DGQLITYKLK ILEDDKQFFP 240
  241 PYFAAPLVRM DTLEKYPQLE EVLNKLAGQL NDDEMRQLNY QVDEEKKEVA QVARDFLLKK 300
  301 GLIK

Type	Start	End	Confidence
Signal Peptide	1	33	0.94
N-region	1	24
H-region	25	30
C-region	31	33
Cleavage Site	33	34
Non-Cytoplasmic	34	304	0.99