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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|83572652, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQSRPWYQLS PEEALMVLGV DAGRGLATIE ARRRLEEKGP NQLQARPGVP PYRLFLSQFQ  60
   61 DLMVLVLLAA TAVSAFLGEV ADAITIVAIV IINAILGFIQ EYRAERSLEA LKEMAAPEAR 120
  121 VRRDGEIRRV PAREIVPGDI LLLESGDRVA ADALVLTGSN LQADEAALTG ESTPVPKAPG 180
  181 ALAGEVALGD RRNMVHQGTV ITGGRGVAVV VATGMATEFG KIAGLLQEVE AEETPLQKRL 240
  241 AALGRWLVLA CLAICIAVVV AGTLRGEDLY GMFLAGVSLA VAAIPEGLPA IVTVCLALGV 300
  301 QKMVQRQAII RKLPAVETLG CATVICSDKT GTLTRNQMTV RRVWVGGRSL QVSGTGYNPR 360
  361 GEYQEKGRRA AVTGDLKMLL TIAAQCNNAQ LQKAGLTIGG WLRGGGGKRD KGEKKGGGIF 420
  421 GKLFDGRDGG EWTISGDPTE GALLVAAAKG GLWRERLERE EPRLAEIPFD SDRKRMSVIC 480
  481 RVGKGLRAYV KGAPDVIFDL CDTILLDGQV VPLDAARRRE IQEENEAMAS RALRVLAVAY 540
  541 RDLEPGTDLQ AAAVEKNLVL VGLIGMIDPP RTEAAAAIQV CRQAGIKVVM ITGDHQVTAR 600
  601 AVARELGLPA GEGEVLNGQQ LEAMDDADLA RMAPGVNVYA RVAPHHKLRL VRALKASGHI 660
  661 VAMTGDGVND APAIKEADIG IAMGQSGTDV TREAAAMILA DDNFATIVAA IEEGRGIYDN 720
  721 VRKFIRYLLS CNIGEVMTMF VAVISGLPLP LLPIQILWMN LVTDGLPAMA LGIDNKEPGL 780
  781 MKRPPHPPGE SVFARGLGKA MAFLGLQIGL ATLGVFILGL YLGDGDLITA RTLAFTTLVM 840
  841 AQLFAVFECR SEHLSPFAVG YFSNPYLVMA VAASLAMQLL VLYLPPLQVV FKTVPLNLFH 900
  901 WGVILLAAGW RTLLGGVNYY LVAQVRRLVW ER

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle