YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|83572237, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPVRREGHAS KDNHERWLLT YSDLITLLMI FFVVMYAISD TNAQKMAALA NSLAQTLTGA  60
   61 PTTGILTSGG LTSIVPGIAP APGQGDEGAE LARARAELQQ YIQQEGLESQ VTLNTEERGL 120
  121 VVSVADAVLF PKGSADLTPE ARDLLRQVGR ALARLPNYLR VEGHTDNLPI NTPAFPSNWE 180
  181 LSTARATNVV KVLISEAGIK PERLSATGYG EYRPVAPNNS EADMARNRRV DIVVLKEAYN 240
  241 VTEPHKGEK

Type	Start	End	Confidence
Cytoplasmic	1	16	0.93
Transmembrane Helix	17	38	0.92
Non-Cytoplasmic	39	58	0.79
Transmembrane Helix	59	75	0.57
Cytoplasmic	76	249	0.63