YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|58257393
Protein type:	Transmembrane
Type Confidence:	0.77
Topology Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASIARPLRQ VACRAGPTSL AQRTLANNVP RIAAFHASSR RNLLPPLPQK IQGTVNDPAP  60
   61 VPSPSPSHGH YHWTFERILA AGLVPLTVAP FAAGSFNPVM DAVLCSTLLR HSHRGLQNVI 120
  121 TDYLPQKRVP KSRKAAMWLL NLATAVVGVG LYEFETNDVG LTEGVRRIWT A

Type	Start	End	Confidence
Cytoplasmic	1	134	0.58
Transmembrane Helix	135	154	0.65
Non-Cytoplasmic	155	171	0.91