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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|190336955, gi...
Protein type: Transmembrane
Type Confidence: 0.78
Topology Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMDVLLALRD LLQLSTRSVL LSLMVCLMLM FRRRQLVPGP FSWPVIGNAA QLGNTPHFYF  60
   61 SRMAQKYGDV FQIKLGSRNV VVLNGDAIKE ALVKKATDFA GRPDFASFRF VSNGKSMAFG 120
  121 NYTPWWKLHR KVAQSTVRNF STANIQTKQT FEKHIVSEIG ELIRLFLNKS REQQFFQPHR 180
  181 YLVVSVANTM SAVCFGNRYA YDDAEFQQVV GRNDQFTKTV GAGSMVDVMP WMQYFPNPIR 240
  241 TLFDQFKELN KEFCAFIELK VSEHRKTISP SHVRDMTDAF IVALDKGLSG GSGVSLDKEF 300
  301 VPPTISDIFG ASQDTLSTAL QWIILLLVRY PEIQKRLQED VDRVVDRSRL PTIADQPHLP 360
  361 YLMAFIYEVM RFTSFTPLTI PHSTTKDTSI NGYPIPKDTV IFVNQWSLNH DPTKWDQPEV 420
  421 FNPQRFLDED GSLNKDLTTN VLIFSLGKRR CIGEDVSKIQ LFLFTSVLVH QCSFKAESTP 480
  481 NMDYEYGLTL KPKPFKVSVT ARDSSDLLDS LVGTSQTPTE KRLKCD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle