YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GNTK_RAT
Protein type:	Globular with Signal Peptide
Type Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METPGVLLVM GVSGSGKSTV GALLANKLGW KFYDADDYHS EENRIKMGKG VPLNDQDRIP  60
   61 WLCSLHDILL RDVASGQSVV LACSALKKMY RDILNRGGSD VPPRSDESAK EEPLAGGKFL 120
  121 VVHLCGSFEL IYGRLLQRRG HFMPPELLQS QFSILEPPSA PENFIHISVD KGLPEIAAAV 180
  181 LEALK

Type	Start	End	Confidence
Signal Peptide	1	21	0.76
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	185	0.97