YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|58257847
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNPLLIFAFV GATVAAPFDD DDKIVGGYTC EENSLPYQVS LNSGSHFCGG SLINKQWVVS  60
   61 AAHCYKPRIQ VRLGEHNIKV LEGNEQFIHA AKIIRHPKYN NETLDNDIML VKLSTPAIIN 120
  121 ARVSTISLPS ALAAAGTECL ISGWGNTLSF GADYPDELQC LDAPVLTQAK CEASYPGKIT 180
  181 SNMFCVGFLE GGKDSCQRDS GGPVVCNGQL QGVVSWGYGC ARKNRPGVYT KVYNYVDWIR 240
  241 DTIAANS

Type	Start	End	Confidence
Signal Peptide	1	15	0.98
N-region	1	6
H-region	7	12
C-region	13	15
Cleavage Site	15	16
Non-Cytoplasmic	16	247	0.99