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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|58198288, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPLDQRRTD SDQEEGFGVQ SRRATDLGMV PNLRRSNSSL CKSRRLLCSF SSEKQENLSS  60
   61 WIPENIKKKE CVYFVESSKL SDAGKVVCEC GYTHEQHIEV AIKPHTFQGK EWDPKKHVHE 120
  121 MPTDAFGDIV FTGLSQKVGK YVRLSQDTSS IVIYQLMTQH WGLDVPSLLI SVTGGAKNFN 180
  181 MKLRLKSIFR RGLVKVAQTT GAWIITGGSH TGVMKQVGEA VRDFSLSSSC KEGDVITIGI 240
  241 ATWGTIHNRE ALIHPMGGFP AEYMLDEEGQ GNLTCLDSNH SHFILVDDGT HGQYGVEIPL 300
  301 RTKLEKFISE QTKERGGVAI KIPIVCVVLE GGPGTLHTIY NAITNGTPCV IVEGSGRVAD 360
  361 VIAQVAALPV SEITISLIQQ KLSVFFQEMF ETFTENQIVE WTKKIQDIVR RRQLLTVFRE 420
  421 GKDGQQDVDV AILQALLKAS RSQDHFGHEN WDHQLKLAVA WNRVDIARSE IFTDEWQWKP 480
  481 SDLHPMMTAA LISNKPEFVR LFLENGVRLK EFVTWDTLLC LYENLEPSCL FHSKLQKVLA 540
  541 EEHERLAYAS ETPRLQMHHV AQVLRELLGD STQLLYPRPR YTDRPRLSLP MPHIKLNVQG 600
  601 VSLRSLYKRS TGHVTFTIDP VRDLLIWAII QNHRELAGII WAQSQDCTAA ALACSKILKE 660
  661 LSKEEEDTDS SEEMLALADE FEHRAIGVFT ECYRKDEERA QKLLVRVSEA WGKTTCLQLA 720
  721 LEAKDMKFVS HGGIQAFLTK VWWGQLCVDN GLWRIILCML AFPLLFTGFI SFREKRLQAL 780
  781 CRPARVRAFF NAPVVIFYLN ILSYFAFLCL FAYVLMVDFQ PSPSWCEYLI YLWLFSLVCE 840
  841 ETRQLFYDPD GCGLMKMASL YFSDFWNKLD VGAILLFIAG LTCRLIPATL YPGRIILSLD 900
  901 FIMFCLRLMH IFTISKTLGP KIIIVKRMMK DVFFFLFLLA VWVVSFGVAK QAILIHNESR 960
  961 VDWIFRGVIY HSYLTIFGQI PTYIDGVNFS MDQCSPNGTD PYKPKCPESD WTGQAPAFPE1020
 1021 WLTVTLLCLY LLFANILLLN LLIAMFNYTF QEVQEHTDQI WKFQRHDLIE EYHGRPPAPP1080
 1081 PLILLSHLQL LIKRIVLKIP AKRHKQLKNK LEKNEEAALL SWELYLKENY LQNQQYQHKQ1140
 1141 RPEQKIQDIS EKVDTMVDLL DMDRVKRSGS TEQRLASLEE QVTQMGRSLH WIVTTLKDSG1200
 1201 FGSGAGALTL AAQRAFDEPD AELSIRKKGE EGGDGYHVSA RHLLYPDARI MRFPVPNEKV1260
 1261 PWEAEFLIYD PPFYTAEKKD ATLTDPVGDT AEPLSKINYN VVDGLMDRCS FHGTYVVQYG1320
 1321 FPLNPMGRTG LRGRGSLSWF GPNHTLQPVV TRWKRNQGGG ICRKSVRKML EVLVMKLPQS1380
 1381 EHWALPGGSR EPGKMLPRKL KQVLQQEYWV TFETLLRQGT EVYKGYVDDP RNTDNAWIET1440
 1441 VAVSIHFQDQ NDVELKRLEE NLQTHDPKES ARGLEMSTEW QVVDRRIPLY VNHKKILQKV1500
 1501 ASLFGAHF

YRC Informatics Platform - Version 3.0
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